Research Problem Area
Topic Area III. Animals and Their Systems
RPA 301. Reproductive Performance of Animals
Animal reproductive biology involves a multi-disciplinary approach to solve costly reproductive
problems and improve reproductive efficiency. Understanding factors that control reproduction
provides methodologies for improving reproduction. New reproductive technologies will evolve
from
research on puberty, ovarian function and cycles, gamete formation and maturation, fertilization,
establishment and maintenance of pregnancy, and placental function, including maternal-fetal
interactions, fetal development and growth, and parturition.
Areas of research include but are not limited to:
- Reducing the age of first breeding in females.
- Improving libido and reducing physical and psychological barriers to mating.
- Methods to control estrus and ovulation.
- Semen metabolism and preservation, and artificial insemination techniques.
- Effects of stress factors on reproductive performance.
- Controlling sex of offspring through sperm separation and other means.
- Increasing the fertilization and conception rate of available ova.
- Increasing the number of potentially fertilizable ova.
- Reducing prenatal, natal, and postnatal mortality.
- Improving mothering ability.
- Methods for early diagnosis of pregnancy.
- Fundamental studies to determine molecular, cellular, and metabolic mechanisms regulating
reproduction.
- Development of reproductive technologies.
- Methods to improve spawning efficiency in fish and shellfish.
- Methods to enhance larval rearing in fish and shellfish.
Exclude research on:
- Nonfarm-raised fish and shellfish, game and fur-bearing animals, and other wildlife. (Use RPA 135)
- Genetic studies to improve reproductive performance. (Use RPA
303)
- Identification of genes that have an effect on reproduction and how they are controlled or
regulated. (Use RPA 304)
RPA 302. Nutrient Utilization in Animals
The efficiency with which animals convert feedstuffs to human food and other products varies
among species, animal products produced, and types of diets. Enhancing the efficiency of
nutrient utilization for animal productivity will require fundamental knowledge on a wide range
of science areas such as molecular and cellular biology, digestion, metabolic processes, and feed
processing technology.
Areas of research include but are not limited to:
- Digestion and metabolism.
- Nutrients required for specific life processes and longevity.
- Hormone and nutrient interactions for maintenance, growth, lactation, and other productivity
functions.
- Composition and biological availability of nutrients of animal feed.
- Effects of processing and feeding system on nutritive values of animal feed.
- Alternate sources of nutrients, including forages and agricultural byproducts.
Exclude research on:
- Reduction of waste carcass fat and proportion of low meat yield cuts. (Use RPA 308)
RPA 303. Genetic Improvement of Animals
A critical component for improving production efficiency of agriculturally important animal
species is through more effective genetic improvement programs. Achieving this requires the
development and application of expanded genetic information and technology ranging from
molecular to
quantitative and statistical.
Areas of research include but are not limited to:
- Estimation of genetic parameters (e.g., heritability, genetic variances and covariances,
heterosis, and breeding values).
- Selection studies.
- Breed evaluation studies.
- Mating systems.
- Development of breeding goals and strategies.
- Identification of genetic defects.
- Incorporation of molecular and genomic information into applied genetic improvement
programs.
- Acquisition and preservation of genetic resources.
Exclude research on:
- Reduction of waste carcass fat and proportion of low meat yield cuts. (Use RPA 308)
- Gene mapping and fundamental molecular genetic and genomic information. (Use RPA 304)
- Gene identification, regulation, and control. (Use RPA 304)
RPA 304. Animal Genome
New developments in molecular biology and the emergence of mapping the human genome have
led to the development of research to map and understand the genome of agriculturally important
animal species. A more complete understanding of animal genome will provide fundamental
information important to genetics, physiology, nutrition, and related sciences relevant to animal
production.
Areas of research include but are not limited to:
- Gene mapping, linkage and physical.
- Gene identification, function repetition, and control.
- Genetic engineering and gene manipulation.
- DNA cloning and sequencing.
- QTL identification and development of marker assisted selection procedures.
Exclude research on:
- Application of marker assisted selection in applied breeding programs. (Use RPA 303)
RPA 305. Animal Physiological Processes
The overall productivity, efficiency, and well-being of agricultural animals is determined by
numerous complex and interactive biological processes and interconversions. Research in this
area includes studies of the fundamental physiological processes within the animal at the
organismal, organ system, cellular, and molecular level.
Areas of research include but are not limited to:
- Chemical and structural organization of animal cells and their specialized properties and
functions, including enzymatic machinery and biochemical conversions.
- Organization, structure, and function of organ systems, including endocrine,
circulatory/vascular, urinary, nervous, muscular, and skeletal systems, the sense organs, the
common integument and its derivatives, and body fluids.
- Physiology of vital life processes and mechanisms of function and control.
- Neural, hormonal, or other chemical messengers that serve as regulators of physiologic
processes and perform integrative functions in the animal.
- Prenatal, neonatal, and postnatal development and growth of animals, including genetic
control mechanisms and accretion, deposition, and degradation of proteins and fats in animal
tissues.
- Lactation physiology, including alveolar development and involution, milk synthesis,
secretion and ejection, milk composition, and patterns of lactation.
Exclude research on:
- Physiology of reproduction and reproductive processes. (Use RPA
301)
RPA 306. Environmental Stress in Animals
This area includes research on stresses from the effects of climate, handling, and other
environmental factors that decrease productivity. Extremes in temperature, humidity, air
movement, and noise may lead to lower reproduction, reduced feed efficiency, anorexia, reduced
disease
resistance, and increased mortality.
Areas of research include but are not limited to:
- Environmental factors that reduce productivity.
- Facilities and equipment that reduce environmental stress.
- Management techniques that enable animals to adapt to stress conditions.
Exclude research on:
- Stress factors that affect reproductive performance. (Use RPA
301)
- Nonfarm-raised fish, shellfish, game and fur-bearing animals, and other wildlife. (Use RPA 135)
- Genetic factors of animal response or adaptability to environmental stress. (Use RPA 303)
- Physiological responses to environmental stress. (Use RPA 305)
- Behavioral responses to environmental stress. (Use RPA 315)
RPA 307. Animal Production Management Systems
Animal-based research to compare total production systems is limited due to cost and resource
requirements. The development of computer technology, analytic methods, and computer models
that simulate animal production systems provide a methodology for critically evaluating
alternative
production systems and management decisions.
Areas of research include but are not limited to:
- Animal-based studies that compare production systems or segments of production
systems.
- Computer simulation models of animal production systems that allow comparisons of
various alternative management components and decisions.
Exclude research on:
- Nonfarm-raised fish, shellfish, game and fur-bearing animals, and other wildlife. (Use RPA 135)
RPA 308. Improved Animal Products (before harvest)
Research on the composition of animal products, factors influencing product quality, and
determination of consumer preferences will guide efforts to maximize animal product quality.
Areas of research include but are not limited to:
- Physiology and biochemistry of fats, proteins, and flavor components of animal
products.
- Factors responsible for development of flavor and other components of product quality.
- Reduction in undesired fat in animal products.
- Improving wool, hides, and other non-food animal products.
- Determination of consumer preferences and factors influencing product acceptability.
Exclude research on:
- Bees and honey. (Use RPA 211)
- Processing techniques for improvement or development of food and non-food products from
animals. (Use RPA 502 or 511)
Animal Protection
RPA 311. Animal Diseases
Research in this area includes studies to manage animal diseases that represent a major hazard to
the production of an adequate and wholesome supply of animal products. Diseases are a constant
threat to the economic welfare of the livestock, poultry, and fish producer. Losses result
from mortality, reduced productivity, cost of treatment or immunization, cost of regulatory
programs, and condemnation of meat at the processing plant.
Areas of research include but are not limited to:
- The nature of causative agents involved in animal diseases.
- Mechanisms of disease resistance and immunity.
- Interrelationships among environment, genetics, and infectious agents in the etiology of
diseases.
- Methods of diagnosis, prevention, treatment, control, and eradication of diseases, including
development of equipment.
- Methods of keeping infectious diseases, such as foot-and-mouth disease and rinderpest, out
of this country.
- Evaluation of alterative control methods.
- Understanding mechanisms involved in transmission of diseases to animals, including the
role of vectors such as insects, ticks, and mites.
- Integrated control systems.
Exclude research on:
- Disorders due to improper nutrition. (Use RPA 302)
- Disorders resulting from pollution. (Use RPA 133)
- Bloat and disorders due to ingestion of toxic plants, etc. (Use RPA
314)
- Disorders due to environmental stress. (Use RPA 306)
- Nonfarm-raised fish, shellfish, game and fur bearing animals, and other wildlife. (Use RPA 135)
RPA 312. External Parasites and Pests of Animals
This research area includes studies of pests and external parasites, including insects, ticks, mites,
and other parasitic arthropods that reduce animal productivity. Economic losses result from
reduced efficiency of weight gains and milk and egg production, as well as the added expense of
labor charges and drug costs. Studies include research on more cost effective methods of control.
Areas of research include but are not limited to:
- Biology and life history of pests.
- Biosystematics/taxonomy.
- Use and development of irradiation, chemosterilants, attractants, repellents, and other
non-insecticidal approaches to insect control.
- Absorption, metabolism, and excretion of insecticides by insects feeding on or in
animals.
- Biological control of insects.
- The nature of insect resistance to chemical controls.
- Evaluation of alternative control methods.
- Development of methods and equipment for applying or using control materials.
- Integrated control systems.
Exclude research on:
- The role of insects, mites, and other arthropods in disease transmission. (Use RPA 311)
- Nonfarm-raised fish, shellfish, game and fur-bearing animals, and other wildlife. (Use RPA 135)
RPA 313. Internal Parasites in Animals
Research in this area includes studies of internal parasites such as various kinds of worms,
flukes, and protozoa. Emphasis is on reducing losses, including those due to mortality, reduced
yield, condemnation of meat, feed wastage, and cost of drugs.
Areas of research include but are not limited to:
- Biotic relationships in parasitism.
- Biosystematics/taxonomy.
- Biocontrol and management practices that minimize reliance on chemicals.
- Safe chemical means including systemics for combating parasites.
- Effective means of diagnosing parasitic infestation.
- Evaluation and development of control methods and equipment.
- Study of heritable traits, breeding, and selection to improve resistance to parasites.
- Integrated control systems.
Exclude research on:
- Nonfarm-raised fish, shellfish, game and fur-bearing animals, and other wildlife. (Use RPA 135)
- Insects, ticks, leeches, and mites. (Use RPA 312)
RPA 314. Toxic Chemicals, Poisonous Plants, Naturally Occurring Toxins,
and Other Hazards Affecting Animals
Research in this area focuses on reduction of losses in productivity in livestock, poultry, and fish
operations due to toxic chemicals, pesticides, poisonous plants, predators, ingestion of metal and
other foreign bodies, and other hazards.
Areas of research include but are not limited to:
- Determining the specific sites and mechanisms of poisoning, bloat, and other disorders to
learn the bases of these phenomena.
- Toxicology and safe levels of residues of pesticides and other chemicals, natural or synthetic,
used directly on or ingested by livestock and poultry.
- Methods of reducing ingestion of pesticides or other chemicals in or on animal feeds.
- Reasons for inter-species differences in detoxification mechanisms and sensitivity to
poisoning by pesticides and other chemicals.
- Developing animal management practices that minimize use of pesticides and other
chemicals that leave toxic residues or that reduce the level of residues.
- Prevention or alleviation of "hardware disease," and effects of plants that cause bloat,
poisoning, or deformities of livestock.
- Developing methods for combating nuclear radiation hazards to livestock.
- Methods for reducing animal losses from predators.
Exclude research on:
- Breeding and selection of feed crops for reduced content of toxic components. (Use RPA 203)
- Pesticides and other toxic substances applied to or ingested by livestock and poultry when
the emphasis is clearly on reduction of the toxic content of foods consumed by humans. (Use RPA 711)
- Disorders resulting from pollution. (Use RPA 133)
- Nonfarm-raised fish, shellfish, game and fur-bearing animals, and other wildlife. (Use RPA 135)
RPA 315. Animal Welfare/Well-being and Protection
The proper stewardship and care of food animals requires research to understand the husbandry
needs of each animal species in a variety of management systems and physical accommodations.
Scientific knowledge, professional judgment, and humane concerns are essential to developing
effective animal care and use programs, and research related to and contributing to the
welfare/well-being of food animals encompasses many broad areas of scientific study.
Areas of research include but are not limited to:
- Fundamental studies related to the assessment of animal well-being, including measures of
adaptation and adaptiveness, measures of social behavior and spacing, physiological measures,
and measures of cognition and motivation.
- Management/confinement production systems related to animal welfare/well-being.
- Controlled environments and environmental factors, including temperature, relative
humidity, ventilation, lighting, and sound related to animal welfare/well-being.
- Housing and equipment design; pen/cage design and densities; feeding, watering, and
bedding practices related to animal welfare/well-being.
- Handling, restraint, transport, and husbandry practices, such as castration, tail docking,
debeaking, and others related to animal welfare/well-being.
- Humane slaughter, euthanasia, and analgesia related to animal welfare/well-being.
- Behavior patterns related to animal welfare/well-being.
- Disease prevention techniques and practices, including management practices, disease
detection and surveillance, assessing disease risks, vaccine development, parasite control, and
others specifically related to animal welfare/well-being.
Exclude research on:
- Etiology of disease, disease agents, internal and external parasites, and toxic hazards. (Use
RPAs 311-314)
- Genetics of disease resistance. (Use RPA 303 or 304)
- Production management systems as related to production efficiency and economic viability.
(Use RPA 307)
- Nonfarm-raised fish, shellfish, game and fur-bearing animals, and other wildlife. (Use RPA 135)